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Updated in March 2023
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Publications
0
20__
Type
Title
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Link
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Keywords
Venue
DOI or ISBN
23
Paper
3
Experimental Entomology in the Age of Video
DAF
Judith Wexler
Sebastian Alvarado
Friedman_JoVe_2023.pdf
AntsBiologyCyberphysicalBeesEcologyApplications
JoVE
e65002
A single-pheromone model accounts for empirical patterns of ant colony foraging previously modeled using two pheromones
Eric Saund
DAF
Saund_Friedman_2023.pdf
AntsComputationalBiologyStigmergyDecentralized SystemsBehavior
Cognitive Systems Research
10.1016/j.cogsys.2023.02.005
A variational synthesis of evolutionary and developmental dynamics
Karl Friston
DAF
Axel Constant
Bleu Knight
Thomas Parr
John Campbell
2303.04898.pdf
Active InferenceComputationalBiologyBayesianGeneticsEcologyFree Energy Principle
arXiv
10.48550/arXiv.2303.04898
Presentation
2
William Blake & Buckminster Fuller: Lives in Juxtaposition (A study in Comprehensivity)
DAF
Blake-Fuller_Lives_in_Juxtaposition-DAF-2023.pdf
BlakeFullerSynergeticsComprehensivityHistoryArtPhilosophy
Preprint
10.5281/zenodo.7514368
Monitoring memetic sense-making across digital publics: Combining rhetorical analysis and ecological frameworks for gathering and analyzing image-memes
Mridula Mascarenhas
DAF
RJ Cordes
RhetoricMemesDecentralized SystemsCognitive SecurityCyberphysical
22
Paper
8
The Free Energy Principle & Active Inference: a Systematic Literature Analysis
Bleu Knight
RJ Cordes
DAF
KnightCordesFriedman_2022_ActInf_FEP_Literature_v1.pdf
Active InferenceBiologyNarrativePhilosophyFree Energy PrincipleDeSci
Preprint
10.5281/zenodo.7449368
An Active Inference Ontology for Decentralized Science: from Situated Sensemaking to the Epistemic Commons
DAF
Shaun Applegate-Swanson
Arhan Choudhury
RJ Cordes
Bleu Knight
Ivan Metelkin
Alex Vyatkin
Shady El Damaty
Avel Guénin—Carlut
Siddhant Shrivastava
Amit Kumar Singh
Jakub Smékal
Caleb Tuttle
v3_ActInf-DeSci-AEOS-2022.pdf
Active InferenceComputationalOnline TeamsCyberphysicalBayesianEcologyDeSciApplications
Preprint
10.5281/zenodo.6320574
Catechism for: "Towards Active Diffusion: A Tale of Multiple (den)Cities"
Jakub Smékal
DAF
Active Diffusion Catechism.pdf
Active InferenceDiffusion ModelsArtComputationalFree Energy PrincipleApplicationsInformation Environment
Preprint
10.5281/zenodo.7443848
Tracking Public Sensemaking through Rhetorical Annotation of Image Memes
Mridula Mascarenhas
RJ Cordes
Bleu Knight
Sarah Murphy
DAF
ECOMEME2-v1.0.pdf
Online TeamsMemesInformation EnvironmentRhetoric
Preprint
10.5281/zenodo.6904427
TrustFinder: Recommendations for a Community-Based System for Finding Trusted Sources and Evaluating Claims
RJ Cordes
Scott David
DAF
VIE-IG_1.pdf
Online TeamsCyberphysicalActive InferenceDeSciApplicationsDecentralized Systems
Preprint
10.5281/zenodo.7093837
On free will or the lack thereof
Robert Sapolsky
Alexandra Mikhailova
DAF
ALIUS Interview-Robert Sapolsky (2022).pdf
Free WillNeuroscienceBehaviorPhilosophyBiology
10.5281/zenodo.7394901
From Users to (Sense)Makers: On the Pivotal Role of Stigmergic Social Annotation in the Quest for Collective Sensemaking
Ronen Tamari
DAF
William Fischer
Lauren Hebert
Dafna Shahaf
Tamari_Friedman_et_al_2022.pdf
StigmergyAttentionAnnotationDecentralized Systems
Preprint
10.48550/arXiv.2205.06345
Predictive Processing Interpretation of the Mirror Test and Implications of a Reflection Prediction for Human Cognition
Sean O'Connor
DAF
Predictive Processing Interpretation of the Mirror Test.pdf
Active InferenceBiologyBayesianAttentionMirror Test
Preprint
10.5281/zenodo.7377256
Book
2
Book of Love
DAF
Alexandra Mikhailova
Other authors
Book of Love 2021-2022.pdf
ArtInnovationNarrative
Collaborative art book
None
Structuring the Information Commons: Open Standards and Cognitive Security
RJ Cordes
Scott David
DAF
Other authors
COGSEC2022-StructuringtheInformationCommons.pdf
Active InferenceCognitive SecurityOnline TeamsCatechismCyberphysicalRhetoricEcologyConflictApplications
Book by
978-1-7364269-3-7
Poster
1
Active Blockference: cadCAD with Active Inference for cognitive systems modeling
Jakub Smékal
Arhan Choudhury
Amit Kumar Singh
Shady El Damaty
DAF
Active Blockference _ IWAI 2022 Poster.pdf
Active InferenceComputationalCognitive SecurityOnline TeamsCyberphysicalDecentralized Systems
21
Paper
7
“Active Inferants: An Active Inference Framework for Ant Colony Behavior”
DAF
Alex Tschantz
Maxwell Ramstead
Axel Constant
Karl Friston
Friedman_2021_InferAnts.pdf
Active InferenceAntsComputationalBiologyStigmergy
Front. Behav. Neurosci.
10.3389/fnbeh.2021.647732
"Digital Rhetorical Ecosystem Analysis: Sensemaking of Digital Memetic Discourse"
DAF
RJ Cordes
Mridula Mascarenhas
ECOMEME v1.1.pdf
RhetoricEcologyOnline Teams
Preprint
10.5281/zenodo.5573947
“Transcript of: Karl Friston, 1st Applied Active Inference Symposium, Active Inference Lab, June 21, 2021”
Karl Friston
Dave Douglass
Maria Luiza Iennaco de Vasconcelos
Stephen Sillett
Lorena Sganzerla
Dean Tickles
Ivan Metelkin
Alex Vyatkin
DAF
v2 - Karl Friston, Applied Active Inference Symposium, ActInfLab, June 21, 2021.pdf
Free Energy PrincipleBiologyActive InferenceOnline TeamsPhilosophyEducation
Preprint
10.5281/zenodo.5797041
"Collaborative Writing for Catechism-Based Teams”
RJ Cordes
DAF
C3PO.pdf
CatechismOnline Teams
Preprint
10.5281/zenodo.4633921
"Knowledge Management Archipelago”
RJ Cordes
DAF
KnowledgeManagementArchipelago_1_0.pdf
Online TeamsComputational
Preprint
10.5281/zenodo.5034809
“Narrative Information Management”
RJ Cordes
DAF
Alexandra Mikhailova
Shaun Applegate-Swanson
Bleu Knight
NIM21 v1.1.pdf
NarrativeCognitive Security
Preprint
10.5281/zenodo.5573287
"Active Inference in Modeling Conflict”
RJ Cordes
DAF
Scott David
AIC v1_2.pdf
Active InferenceCyberphysicalCognitive SecurityConflictMilitary
Preprint
10.5281/zenodo.5759807
Playbook
2
"The Facilitator's Catechism Playbook”
RJ Cordes
DAF
FaciliatorsCatechismPlaybook.pdf
CatechismInnovationOnline Teams
Preprint
10.5281/zenodo.4579414
"Innovator’s Digital Playbook”
RJ Cordes
DAF
Monica Kang
Innovators-Digital-Playbook.pdf
CatechismInnovationOnline Teams
Preprint
978-0-578-31739-7
Book
1
“Narrative Information Ecosystems: Conflict and Trust on the Endless Frontier”
RJ Cordes
DAF
NIE_21_Cordes_Friedman.pdf
CatechismInnovationOnline TeamsActive InferenceCognitive SecurityNarrativeConflictMilitary
Book by
978-1-7364269-2-0
20
Book
1
“The Great Preset: Remote Teams and Operational Art”
RJ Cordes
DAF
GreatPreset_Friedman_Cordes_2020.pdf
Cognitive SecurityOnline TeamsCyberphysical
Book by
978-1-7364269-0-6
Course
2
"How to use Keybase for remote teams”
DAF
Online TeamsEducation
Udemy
"Communication for Remote Teams”
DAF
Online TeamsEducation
Udemy
Paper
10
“Active Inference & Behavior Engineering for Teams”
Alex Vyatkin
Ivan Metelkin
Alexandra Mikhailova
RJ Cordes
DAF
AIN1_Act_Inf_Narratives_v1.pdf
Active InferenceOnline TeamsComputational
Preprint
10.5281/zenodo.4021163
“Gene expression variation in the brains of harvester ant foragers is associated with collective behavior”
DAF
Ryan York
Austin Hilliard
Deborah Gordon
Friedman_York_PogoGeneExpress_2020.pdf
GeneticsAnts
Communications Biology
10.1038/s42003-020-0813-8
“Distributed physiology and the molecular basis of social life in eusocial insects”
DAF
Tim Linksvayer
Brian Johnson
Friedman_DistributedPhysiology_2020.pdf
AntsBiology
Hormones & Behavior
10.1016/j.yhbeh.2020.104757
“Measurement of natural variation of neurotransmitter tissue content in red harvester ant brains among different colonies.”
Mimi Shin
DAF
Deborah Gordon
BJ Venton
Shin2020_Article_MeasurementOfNeurotransmitters.pdf
Ants
Analytical and Bioanalytical Chemistry
10.1007/s00216-019-02355-3
“The Facilitator's Catechism”
RJ Cordes
DAF
The Facilitators Catechismv2.pdf
CatechismOnline TeamsMilitaryCognitive Security
Preprint
10.5281/zenodo.4203765
“Infinite Games for Infinite Teams”
RJ Cordes
DAF
,
infinite_games_for_infinite_teams.pdf
ComputationalCognitive Security
COGSEC / Polyplexus
None
“Emergent Teams for Complex Threats”
RJ Cordes
DAF
CordesFriedman2020_Emergent_Teams.pdf
Cognitive SecurityOnline TeamsMilitary
Preprint
10.5281/zenodo.3986085
“Reimagining Maps”
RJ Cordes
DAF
Mikel Maron
Reimagining Maps.pdf
MapsInnovationOnline Teams
Preprint
10.5281/zenodo.4170026
“The Innovator’s Catechism”
Steven Phelan
RJ Cordes
DAF
The Innovators Catechism.pdf
CatechismInnovation
Preprint
10.5281/zenodo.4383230
“The neuroscience of decision making”
Timothy Hanks
Alexandra Mikhailova
DAF
theneuroscienceofdecisionmaking_tdhanks.pdf
Bayesian
ALIUS Bulletin
10.34700/8pg4-0h12
19
Paper
3
“The physiology of forager hydration and variation among harvester ant (Pogonomyrmex barbatus) colonies in collective foraging“
DAF
Deborah Gordon
Mike Greene
Friedman_2019_Pogo_Humidity.pdf
AntsBiology
Science Reports
10.1038/s41598-019-41586-3
“Dennett Explained”
Daniel Dennett
Brendan Fleig-Goldstein
DAF
ALIUS_bulletin03-dennett_2019.pdf
Philosophy
ALIUS Bulletin
10.34700/7gkw-zh08
“The ant colony as a test for scientific theories of consciousness”
Eirik Søvik
DAF
Friedman-Søvik2021_Article_TheAntColonyAsATestForConsciousness.pdf
AntsPhilosophy
Synthese
10.1007/s11229-019-02130-y
PhD Dissertation
1
Behavioral, Physiological, and Transcriptomic Variation Among Colonies of the Red Harvester Ant (Pogonomyrmex barbatus)
DAF
Friedman_2019_PhD_Dissertation_Overview.pdf
AntsBiologyEcology
PhD Dissertation
18
Paper
4
"Partner Pen Play in Parallel (PPPiP): A New PPPiParadigm for Relationship Improvement"
Alexandra Mikhailova
DAF
PPPiP_2018_Mikhailova_Friedman.pdf
Art
Arts
10.3390/arts7030039
“Foraging behavior and locomotion of the invasive Argentine ant from winter aggregations”
Ben Burford
Ga-il Lee
DAF
E Brachmann
Rebia Khan
Dylan MacArthur-Waltz
Aiden McCarty
Deborah Gordon
Burford_2018_Argentine_Foraging.pdf
AntsBiology
PLoS One
10.1371/journal.pone.0202117
“The Role of Dopamine in the Collective Regulation of Foraging in Harvester Ants”
DAF
Anna Pilko
Dorota Skowronska-Krawczy
Karolina M Krasinska
J Parker
J Hirsh
Deborah Gordon
Friedman_2018_Dopamine_Foraging_Pogo.pdf
Ants
iScience.
10.1016/j.isci.2018.09.001
“Of woodlice and men: A Bayesian account of cognition, life and consciousness”
Karl Friston
Martin Fortier
DAF
Friston_Friedman_Fortier_2018_of_woodlice_and_men.pdf
Active Inference
ALIUS Bulletin
10.34700/h460-nz89
17
Paper
2
“Two lineages that need each other"
DAF
Deborah Gordon
Molecular Ecology - 2017 - Gordon - Two lineages that need each other.pdf
AntsGenetics
Molecular Ecology
10.1111/mec.13964
“The MutAnts are here”
DAF
Liqun Luo
Deborah Gordon
FriedmanGordonLuo_MutAnts_2017.pdf
AntsGenetics
Cell
10.1016/j.cell.2017.07.046
16
Paper
3
“Ant Genetics: Reproductive Physiology, Worker Morphology, and Behavior”
DAF
Deborah Gordon
Friedman_Gordon_2016_Ant_Genetics_review.pdf
AntsGenetics
Annual Reviews Neuroscience
10.1146/annurev-neuro-070815-013927
"Influence of Nuclear Structure on the formation of radiation-induced lethal lesions"
DAF
Lauren Tait
Andrew Vaughan
Friedman_nuclear_structure_2016.pdf
Genetics
Int. J. Radiation Biology
10.3109/09553002.2016.1144941
“Context-dependent expression of the foraging gene in field colonies of ants: the interacting roles of age, environment and task”
KK Ingram
Mike Greene
J Kahler
S Peteru
Deborah Gordon
DAF
Ingram_2016_Circadian_foraging.pdf
AntsGenetics
Proc. Royal Soc. B.
10.1098/rspb.2016.0841
15
Paper
3
“Commentary: Portuguese crypto-Jews: the genetic heritage of a complex history”
AW Marcus
Emily Ebel
Marcus_Crypto-Jews_2015.pdf
Genetics
Frontiers in Genetics
10.3389/fgene.2015.00261
“Could Ehrlichial Infection Cause Some of the Changes Associated with Leukemia, Myelodysplastic Diseases and Autoimmune Disorders, and Offer Antibiotic Treatment Options?”
CA Kallick
MBA Nyindo
DAF
Kallick_2015_Ehrlichia.pdf
Genetics
Medical Hypotheses
10.1016/j.mehy.2015.09.015
"Large Scale Coding Sequence Change Underlies the Evolution of Post-developmental Novelty in Honey Bees"
WC Jasper
Tim Linksvayer
Joel Atallah
DAF
JC Chiu
Brian Johnson
Jasper_2014_HoneyBeeGeneExpression.pdf
BeesGenetics
Mol. Bio. and Evolution
10.1093/molbev/msu292

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