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Updated in October 2024
Daniel Ari Friedman
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Works & Publications
20
Type
Title
URL
Venue
Collaborators
PDF
DOI or ISBN
Keywords
Video
Perplexity chat link
24
17
Paper
13
Federated inference and belief sharing
Karl Friston
Thomas Parr
Conor Heins
Axel Constant
DAF
Takuya Isomura
Chris Fields
Tim Verbelen
Maxwell Ramstead
John Clippinger
Christopher Frith
10.1016/j.neubiorev.2023.105500
Active Inference
Computational
Biology
Cognitive Security
Bayesian
Philosophy
Free Energy Principle
Shared Protentions in Multi-Agent Active Inference
Mahault Albarracin
Riddhi Jain Pitliya
Toby Benedict St. Clere Smith
DAF
Karl Friston
Maxwell Ramstead
10.3390/e26040303
Active Inference
Category Theory
Multi-agent
Cognitive Security
Free Energy Principle
Decentralized Systems
Aligning Active Inference Ontology to SUMO
Dave Douglass
DAF
Other authors
10.5281/zenodo.11459322
Active Inference
Ontology
SUMO
Information Environment
Inter-Framework
Bridging gaps in image meme research: A multidisciplinary paradigm for scaling up qualitative analyses
Mridula Mascarenhas
RJ Cordes
DAF
10.1002/asi.24900
Cognitive Security
Cyberphysical
Narrative
Applications
Annotation
Memes
Why Paleolithic Rockstars were both enigmatic and sporadic: A Comment on: ‘Snakes and ladders’ in paleoanthropology: From cognitive surprise to skillfulness a million years ago
DAF
Dean Tickles
10.1016/j.plrev.2024.04.010
Active Inference
Biology
Innovation
Philosophy
Information Environment
Four-fold Fields of Quantum Dreams
DAF
Dean Tickles
10.5281/zenodo.10798145
Active Inference
Maps
Philosophy
Art
Applications
Memes
Baseball
Way Finding in the Infinite Imaginarium: Juxtaposing Epistemic Tempos and Modes
DAF
10.5281/zenodo.10601082
Active Inference
Biology
Philosophy
Art
Push and Pull: A priming sequence
DAF
10.5281/zenodo.10659375
Cognitive Security
Active Inference
Education
Applications
Attention
Behavior
Chemical and transcriptomic diversity do not correlate with ascending levels of social complexity in the insect order Blattodea
Marek Golian
DAF
Mark Harrison
Dino McMahon
Jan Buellesbach
10.1002/ece3.70063
Biology
Termites
Entomology
Social
Cuticular Hydrocarbons
Bioinformatics
Comments Submitted by BlockScience, University of Washington APL Information Risk and Synthetic Intelligence Research Initiative (IRSIRI), Cognitive Security and Education Forum (COGSEC), and the Active Inference Institute (AII) to the Networking and Information Technology Research and Development National Coordination Office's Request for Comment on The Creation of a National Digital Twins R&D Strategic Plan NITRD-2024-13379
Michael Zargham
David Sisson
Scott David
DAF
RJ Cordes
10.5281/zenodo.13273681
Digital Twin
Computational
Cognitive Security
Online Teams
Cyberphysical
Maps
Decentralized Systems
Enhancing Population-based Search with Active Inference
Nassim Dehouche
DAF
10.48550/arXiv.2408.09548
Ants
Active Inference
Computational
Free Energy Principle
Applications
Stigmergy
Thoughtseeds: Evolutionary Priors, Nested Markov Blankets, and the Emergence of Embodied Cognition
Prakash Kavi
Gorka Lopez
DAF
10.48550/arXiv.2408.15982
Active Inference
Free Energy Principle
Computational
Biology
Bayesian
FarmWorks: Decentralized AI Agents for Personalized Solutions
DAF
Other authors
10.5281/zenodo.13754585
Active Inference
Computational
Biology
Cognitive Security
Cyberphysical
Information Environment
Livestream
2
DAF
Other authors
10.5281/zenodo.7964130
Active Inference
Computational
Biology
Cognitive Security
Bayesian
Free Energy Principle
DAF
Other authors
Active Inference
Ants
Biology
Cognitive Security
Innovation
Philosophy
Art
Synergetics
Essay
1
DAF
O. C. Ripley
978-3-8365-9970-2
Memes
Art
NFT
History
Presentation
1
MathArt Stream #8 ~ William Blake and Active Inference
Shanna Dobson
Dean Tickles
Héctor Manrique
10.5281/zenodo.13711301
Active Inference
Biology
William Blake
Attention
Mirror Test
23
26
Paper
18
A single-pheromone model accounts for empirical patterns of ant colony foraging previously modeled using two pheromones
Eric Saund
DAF
10.1016/j.cogsys.2023.02.005
Ants
Computational
Biology
Stigmergy
Decentralized Systems
Behavior
A variational synthesis of evolutionary and developmental dynamics
Karl Friston
DAF
Axel Constant
Bleu Knight
Thomas Parr
John Campbell
10.3390/e25070964
Active Inference
Computational
Biology
Bayesian
Genetics
Ecology
Free Energy Principle
ATLAS: A Question Oriented Approach to the Use of Pattern Languages in Knowledge Management
RJ Cordes
Scott David
DAF
Alexandra Mikhailova
Andrew Penland
Sam Young
Colten Zacharias
10.5281/zenodo.10296601
Computational
Cognitive Security
Online Teams
Cyberphysical
Active Inference
Innovation
Decentralized Systems
Information Environment
Experimental Entomology in the Age of Video
DAF
Judith Wexler
Sebastian Alvarado
e65002
Ants
Biology
Cyberphysical
Bees
Ecology
Applications
Generalized Notation Notation for Active Inference Models
Jakub Smékal
DAF
10.5281/zenodo.7803328
Active Inference
Computational
Free Energy Principle
Applications
Cognitive Sovereignty & Active Inference in the State of Exception
DAF
10.5281/zenodo.10038232
Active Inference
Cognitive Security
Cyberphysical
Philosophy
Narrative
Conflict
Applications
Open Access science needs Open Science Sensemaking (OSSm): open infrastructure for sharing scientific sensemaking data
Ronen Tamari
DAF
10.31222/osf.io/9nb3u
Computational
Cognitive Security
Online Teams
Cyberphysical
DeSci
Information Environment
To comment or not to comment, that is the question!: Comment on “To copy or not to copy?...”
Dean Tickles
DAF
10.1016/j.plrev.2023.06.002
Active Inference
Free Energy Principle
Biology
Cognitive Security
Innovation
Attention
Generative Research Teams: Active Inference Compositions For Research and Meta-Science
Jakub Smékal
DAF
10.5281/zenodo.8164667
Active Inference
Free Energy Principle
Biology
Cognitive Security
Innovation
Online Teams
DeSci
The Active Inference Institute and Active Inference Ecosystem
DAF
Other authors
10.5281/zenodo.8266281
Active Inference
Online Teams
Cyberphysical
Cognitive Security
Maps
Narrative
Rhetoric
Education
DeSci
Applications
Decentralized Systems
Information Environment
Comprehensivity
A snapshot and pipeline for tissue-specific gene expression meta-analysis in honey bees (Apis mellifera)
DAF
Chao Tong
Tim Linksvayer
Matthias Freund
Nicole Weronika Keough
Brian Johnson
10.5281/zenodo.10400744
Biology
Computational
Genetics
Bees
Information Environment
Applications
An Account of Active Inference Modeling
DAF
10.5281/zenodo.8415313
Active Inference
Free Energy Principle
Biology
Cognitive Security
DeSci
Distributed Science - The Scientific Process as Multi-Scale Active Inference
Francesco Balzan
John Campbell
Karl Friston
Maxwell Ramstead
DAF
Axel Constant
10.31219/osf.io/dnw5k
Active Inference
Free Energy Principle
Biology
Cognitive Security
DeSci
Decentralized Systems
The Properties, Processes, and Perspectives Inter-Framework (P3IF): Multiplexing interdisciplinary requirements frameworks to manage information risk and foster cognitive security
Tom Wilkinson
Scott David
RJ Cordes
DAF
10.5281/zenodo.10034512
Cognitive Security
Health Security
Requirements Engineering
Inter-Framework
P3IF
A guided tour through the spaces of particular “minds”: A Comment on “Path integrals, particular kinds, and strange things”
Ali Rahmjoo
DAF
10.1016/j.plrev.2023.11.001
Active Inference
Free Energy Principle
Biology
Decentralized Systems
Maps
Neuroscience
Enhanced NSF Postdoctoral Reporting via Synthetic Intelligence Language Processing
DAF
10.5281/zenodo.10160656
Cognitive Security
Cyberphysical
Innovation
Rhetoric
Education
Decentralized Systems
Stigmergy
Requirements Engineering
Comments on AI Accountability Policy Submitted to NTIA Docket 2023-0005-0001 by IRSIRI, AII, PFH, and COGSEC
Scott David
Jumana Abu-Ghazaleh
DAF
RJ Cordes
10.5281/zenodo.8025957
Active Inference
Computational
Cognitive Security
Cyberphysical
Applications
Information Environment
A Natural AI Based on The Science of Computational Physics, Biology and Neuroscience: Policy and Societal Significance
DAF
Other authors
10.5281/zenodo.10360148
Active Inference
Free Energy Principle
Cognitive Security
Computational
Cyberphysical
Policy
Presentation
6
William Blake & Buckminster Fuller: Lives in Juxtaposition (A study in Comprehensivity)
DAF
10.5281/zenodo.7514368
Blake
Fuller
Synergetics
Comprehensivity
History
Art
Philosophy
Monitoring memetic sense-making across digital publics: Combining rhetorical analysis and ecological frameworks for gathering and analyzing image-memes
Mridula Mascarenhas
DAF
RJ Cordes
None
Rhetoric
Memes
Decentralized Systems
Cognitive Security
Cyberphysical
Of Ants & Aging
DAF
10.5281/zenodo.7855582
Aging
Ants
Computational
Biology
Maps
Applications
History
Modern Nostr Index Card-based Knowledge Engineering
Andrew Claros
DAF
10.5281/zenodo.8118156
Innovation
Cyberphysical
Computational
Applications
Decentralized Systems
Information Environment
Slides for Iris
DAF
10.5281/zenodo.7838653
Innovation
Cyberphysical
Cognitive Security
Computational
Active Inference
Applications
Information Environment
Postdoc review (2020-2023) ~ September 25, 2023
DAF
10.5281/zenodo.8377988
Active Inference
Ants
Biology
Cognitive Security
Cyberphysical
Genetics
Education
Synergetics
Comprehensivity
Poster
1
Active Blockference: cadCAD with Active Inference for cognitive systems modeling
Jakub Smékal
Arhan Choudhury
Amit Kumar Singh
Shady El Damaty
DAF
10.1007/978-3-031-28719-0_10
Active Inference
Computational
Cognitive Security
Online Teams
Cyberphysical
Decentralized Systems
Course
1
Transcript of Chris Fields, "Physics as Information Processing" course in 2023
Chris Fields
DAF
Other authors
10.5281/zenodo.10447642
Active Inference
Computational
Biology
Philosophy
Free Energy Principle
Information Environment
22
11
Paper
9
From Users to (Sense)Makers: On the Pivotal Role of Stigmergic Social Annotation in the Quest for Collective Sensemaking
Ronen Tamari
DAF
William Fischer
Lauren Hebert
Dafna Shahaf
10.48550/arXiv.2205.06345
Stigmergy
Attention
Annotation
Decentralized Systems
Tracking Public Sensemaking through Rhetorical Annotation of Image Memes
Mridula Mascarenhas
RJ Cordes
Bleu Knight
Sarah Murphy
DAF
10.5281/zenodo.6904427
Online Teams
Memes
Information Environment
Rhetoric
An Active Inference Ontology for Decentralized Science: from Situated Sensemaking to the Epistemic Commons
DAF
Shaun Applegate-Swanson
Arhan Choudhury
RJ Cordes
Bleu Knight
Ivan Metelkin
Alex Vyatkin
Shady El Damaty
Avel Guénin—Carlut
Siddhant Shrivastava
Amit Kumar Singh
Jakub Smékal
Caleb Tuttle
10.5281/zenodo.6320574
Active Inference
Computational
Online Teams
Cyberphysical
Bayesian
Ecology
DeSci
Applications
TrustFinder: Recommendations for a Community-Based System for Finding Trusted Sources and Evaluating Claims
RJ Cordes
Scott David
DAF
10.5281/zenodo.7093837
Online Teams
Cyberphysical
Active Inference
DeSci
Applications
Decentralized Systems
Predictive Processing Interpretation of the Mirror Test and Implications of a Reflection Prediction for Human Cognition
Sean O'Connor
DAF
10.5281/zenodo.7377256
Active Inference
Biology
Bayesian
Attention
Mirror Test
On free will or the lack thereof
Robert Sapolsky
Alexandra Mikhailova
DAF
10.5281/zenodo.7394901
Free Will
Neuroscience
Behavior
Philosophy
Biology
Catechism for: "Towards Active Diffusion: A Tale of Multiple (den)Cities"
Jakub Smékal
DAF
10.5281/zenodo.7443848
Active Inference
Diffusion Models
Art
Computational
Free Energy Principle
Applications
Information Environment
The Free Energy Principle & Active Inference: a Systematic Literature Analysis
Bleu Knight
RJ Cordes
DAF
10.5281/zenodo.7449368
Active Inference
Biology
Narrative
Philosophy
Free Energy Principle
DeSci
Systems Modeling and Cognitive Audits for Hypercert Ecosystems
Jakub Smékal
DAF
10.5281/zenodo.7626769
Active Inference
Free Energy Principle
DeSci
Cognitive Security
Computational
Online Teams
Cyberphysical
Book
2
Structuring the Information Commons: Open Standards and Cognitive Security
RJ Cordes
Scott David
DAF
Other authors
978-1-7364269-3-7
Active Inference
Cognitive Security
Online Teams
Catechism
Cyberphysical
Rhetoric
Ecology
Conflict
Applications
21
9
Paper
6
Active Inferants: An Active Inference Framework for Ant Colony Behavior
DAF
Alex Tschantz
Maxwell Ramstead
Axel Constant
Karl Friston
10.3389/fnbeh.2021.647732
Active Inference
Ants
Computational
Biology
Stigmergy
Active Inference in Modeling Conflict
RJ Cordes
DAF
Scott David
10.5281/zenodo.5759807
Active Inference
Cyberphysical
Cognitive Security
Conflict
Military
Digital Rhetorical Ecosystem Analysis: Sensemaking of Digital Memetic Discourse
DAF
RJ Cordes
Mridula Mascarenhas
10.5281/zenodo.5573947
Rhetoric
Ecology
Online Teams
Narrative Information Management
RJ Cordes
DAF
Alexandra Mikhailova
Shaun Applegate-Swanson
Bleu Knight
10.5281/zenodo.5573287
Narrative
Cognitive Security
Collaborative Writing for Catechism-Based Teams
RJ Cordes
DAF
10.5281/zenodo.4633921
Catechism
Online Teams
Knowledge Management Archipelago
RJ Cordes
DAF
10.5281/zenodo.5034809
Online Teams
Computational
Book
1
Narrative Information Ecosystems: Conflict and Trust on the Endless Frontier
RJ Cordes
DAF
978-1-7364269-2-0
Catechism
Innovation
Online Teams
Active Inference
Cognitive Security
Narrative
Conflict
Military
20
13
Paper
10
The Innovator’s Catechism
Steven Phelan
RJ Cordes
DAF
10.5281/zenodo.4383230
Catechism
Innovation
The Facilitator's Catechism
RJ Cordes
DAF
10.5281/zenodo.4203765
Catechism
Online Teams
Military
Cognitive Security
The neuroscience of decision making
Timothy Hanks
Alexandra Mikhailova
DAF
10.34700/8pg4-0h12
Bayesian
Active Inference & Behavior Engineering for Teams
Alex Vyatkin
Ivan Metelkin
Alexandra Mikhailova
RJ Cordes
DAF
10.5281/zenodo.4021163
Active Inference
Online Teams
Computational
Infinite Games for Infinite Teams
RJ Cordes
DAF
None
Computational
Cognitive Security
Distributed physiology and the molecular basis of social life in eusocial insects
DAF
Tim Linksvayer
Brian Johnson
10.1016/j.yhbeh.2020.104757
Ants
Biology
Emergent Teams for Complex Threats
RJ Cordes
DAF
10.5281/zenodo.3986085
Cognitive Security
Online Teams
Military
Gene expression variation in the brains of harvester ant foragers is associated with collective behavior
DAF
Ryan York
Austin Hilliard
Deborah Gordon
10.1038/s42003-020-0813-8
Genetics
Ants
Measurement of natural variation of neurotransmitter tissue content in red harvester ant brains among different colonies.
Mimi Shin
DAF
Deborah Gordon
BJ Venton
10.1007/s00216-019-02355-3
Ants
Book
1
The Great Preset: Remote Teams and Operational Art
RJ Cordes
DAF
978-1-7364269-0-6
Cognitive Security
Online Teams
Cyberphysical
19
4
Paper
3
Dennett Explained
Daniel Dennett
Brendan Fleig-Goldstein
DAF
10.34700/7gkw-zh08
Philosophy
The ant colony as a test for scientific theories of consciousness
Eirik Søvik
DAF
10.1007/s11229-019-02130-y
Ants
Philosophy
The physiology of forager hydration and variation among harvester ant (Pogonomyrmex barbatus) colonies in collective foraging
DAF
Deborah Gordon
Mike Greene
10.1038/s41598-019-41586-3
Ants
Biology
PhD Dissertation
1
Behavioral, Physiological, and Transcriptomic Variation Among Colonies of the Red Harvester Ant (Pogonomyrmex barbatus)
DAF
Ants
Biology
Ecology
18
4
Paper
4
“The Role of Dopamine in the Collective Regulation of Foraging in Harvester Ants”
DAF
Anna Pilko
Dorota Skowronska-Krawczy
Karolina M Krasinska
J Parker
J Hirsh
Deborah Gordon
10.1016/j.isci.2018.09.001
Ants
“Foraging behavior and locomotion of the invasive Argentine ant from winter aggregations”
Ben Burford
Ga-il Lee
DAF
E Brachmann
Rebia Khan
Dylan MacArthur-Waltz
Aiden McCarty
Deborah Gordon
10.1371/journal.pone.0202117
Ants
Biology
"Partner Pen Play in Parallel (PPPiP): A New PPPiParadigm for Relationship Improvement"
Alexandra Mikhailova
DAF
10.3390/arts7030039
Art
“Of woodlice and men: A Bayesian account of cognition, life and consciousness”
Karl Friston
Martin Fortier
DAF
10.34700/h460-nz89
Active Inference
17
2
Paper
2
“Two lineages that need each other"
DAF
Deborah Gordon
10.1111/mec.13964
Ants
Genetics
16
3
Paper
3
“Context-dependent expression of the foraging gene in field colonies of ants: the interacting roles of age, environment and task”
KK Ingram
Mike Greene
J Kahler
S Peteru
Deborah Gordon
DAF
10.1098/rspb.2016.0841
Ants
Genetics
“Ant Genetics: Reproductive Physiology, Worker Morphology, and Behavior”
DAF
Deborah Gordon
10.1146/annurev-neuro-070815-013927
Ants
Genetics
"Influence of Nuclear Structure on the formation of radiation-induced lethal lesions"
DAF
Lauren Tait
Andrew Vaughan
10.3109/09553002.2016.1144941
Genetics
15
3
Paper
3
“Could Ehrlichial Infection Cause Some of the Changes Associated with Leukemia, Myelodysplastic Diseases and Autoimmune Disorders, and Offer Antibiotic Treatment Options?”
CA Kallick
MBA Nyindo
DAF
10.1016/j.mehy.2015.09.015
Genetics
"Large Scale Coding Sequence Change Underlies the Evolution of Post-developmental Novelty in Honey Bees"
WC Jasper
Tim Linksvayer
Joel Atallah
DAF
JC Chiu
Brian Johnson
10.1093/molbev/msu292
Bees
Genetics
“Commentary: Portuguese crypto-Jews: the genetic heritage of a complex history”
AW Marcus
Emily Ebel
10.3389/fgene.2015.00261
Genetics
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