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DL - Models exercises



Articles : Predicting Perturbations Outcomes & State changes


Article 1


scGen predicts single-cell perturbation responses / Generative modeling and latent space arithmetics predict single-cell perturbation response across cell types, studies and species


Article 2

Generative adversarial networks simulate gene expression and predict perturbations in single cells.


Exercice Article 1 ( spend more time here )
0
Done
Overall Value
Task
1
-
Read article
2
-
Read Notebook implementation
3
25%
Comment the code → a DL beginner should understand
4
25%
Use the Streamlit Python library to create a draft application of the model.
5
10%
Suggest 1 possible improvement, how would you code it?
There are no rows in this table


Exercice Article 2 (spend less time here)
0
Done
Value
Task
1
-
Read article
2
-
Read implementation
3
10%
Comment
parts
of the code.
4
10%
Make a Streamlit view.
There are no rows in this table


Exercice Data Aggregation
0
Done
Value
Task
1
10%
What tools below would you select for Whole Cell data collection? In which order, why?
2
10%
If you were to build your data collection pipeline, would you add different tools? add functionalities to the tools selected above? Give some details.
There are no rows in this table
Tools:


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